Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803070.1_cds_XP_016482781.1_7376
CDS Infomation

[gene=LOC107803551] [db_xref=GeneID:107803551] [protein=probable pectinesterase/pectinesterase inhibitor 20] [protein_id=XP_016482781.1] [location=join(11430..12357,13127..13818)] [gbkey=CDS]
Sequence

ATGTGGCAAATGCCTATATATGCCCATATTATCGAGATCTACACATTGATAAACATTATG
GGAATAGTGCCTAAAATTGTCGCTCTCTTTCTAATCATCACCTTTCATTGCTCCTCTCCC
TTTGCCGCACCATCTTCTTCCTTTTGCGACATCACTCCCTTCCCTGACTTGTGCAAATAT
TTTCTTCCTCAAAACAAGTCTACAAACATACATGACTATGTAAGGCTGTCCATCCATCTT
TCATCATCAGCAACTACAAAATTTCTTGATTCAATCAACGGTTACTTAAACTCAAAAAAT
ATATCATCTCAAAGTAGCATATTTGTCCTCCAAGATTGCCAATTGCTTATTGGCCTAAAT
TTGGATTTTTTATCCAATGTCGCGACTACTATTAGCCAACCTGGAAATACCCTTCAGGGT
TCAGAATTTGATGATGTCGAAACCTTGCTTAGTGCATCTATAACAAATCAACAAACCTGT
TTGGATAGCCTTCAAATCACTCCTTCAGCTGCAGACATTGCGAGTCAGATTTTTCCTACA
CTCGCTAATGGCAGCATGATGTATAGCGTGTCTCTCGCCCTTTTTAAGTATGGCTGGCTT
CCTAATTCACCAACAAGAGGTGGACGAAAGCTGTTGCAAATGAGTGGAATTAGTTCTGTA
AACGTGACACAAATGGTAGTGGTAAATCCAGATGGATCTGGGAATTACACAACCATCAAT
GATGCAATTGCAGCTGCGCCAAATAATACGAAAGCAGGAAACGGATATTACAAGATATAT
GTGGTTGCTGGTGTGTACCAAGAGTATGTCTCTATTGCCAATAACAAGAAGTATTTGATG
ATGGTTGGTGATGGCATTAATAAGACTATTATCACTGGTAATCACAGCGTAGTTGATGGA
TGGACAACCTTCAATTCTGCCACATTTGCTGTGGTCGGGGAAGGATTTCTGGCAATGAAC
ATTACCTTTCAGAACACAGCAGGAGCAATAAAGCATCAAGCAGTGGCAGTTCGAAATGGT
GCTGATCTCTCTACATTTTACAATTGCAGCTTTGAAGGGTATCAAGACACTTTGTACACA
CATTCTATGAGACAATTCTACAGGGAATGTGATATATACGGGACGATCGATTTCATTTTC
GGAAATGCTGCTGTAGTTTTCCAGAACTGTAACATATATCCACGCCTTCCATTACAAGGC
CAGTTTAATCCAATAACTGCACAGGGAAGAACTGACATAAACCAGAATACGGGCACATCC
ATTCACAATTGCACCATAAAAGCTGCCCCTGATCTAGCCTTGAGCAATGGCACTACACAG
ACATATTTAGGCCGGCCGTGGAAGGAGTATTCAAGAACAGTTTATATGCAATCCTTCATG
GATAGCCTGATAAATCCTGCTGGTTGGGCAGCTTGGTCTGGAGATTTCGCGCTAAGTACG
TTATATTATGCTGAATATAACAACACAGGCCCTGGATCCAATACGAGCAGCAGGGTAACT
TGGCCTGGTTATCATGTGATTAACAGCACAGATGCTATCAGTTATACAGTTTCCAATTTC
ATAGCAGGGAACTTTTGGCTGCCTGCCACTGGAGTCCCTTATACTGGTGATTTACTTTAA

Peptide Sequence

PEP ID

XP_016482781.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 20 [Nicotiana tabacum]
Sequence

MWQMPIYAHIIEIYTLINIMGIVPKIVALFLIITFHCSSPFAAPSSSFCDITPFPDLCKY
FLPQNKSTNIHDYVRLSIHLSSSATTKFLDSINGYLNSKNISSQSSIFVLQDCQLLIGLN
LDFLSNVATTISQPGNTLQGSEFDDVETLLSASITNQQTCLDSLQITPSAADIASQIFPT
LANGSMMYSVSLALFKYGWLPNSPTRGGRKLLQMSGISSVNVTQMVVVNPDGSGNYTTIN
DAIAAAPNNTKAGNGYYKIYVVAGVYQEYVSIANNKKYLMMVGDGINKTIITGNHSVVDG
WTTFNSATFAVVGEGFLAMNITFQNTAGAIKHQAVAVRNGADLSTFYNCSFEGYQDTLYT
HSMRQFYRECDIYGTIDFIFGNAAVVFQNCNIYPRLPLQGQFNPITAQGRTDINQNTGTS
IHNCTIKAAPDLALSNGTTQTYLGRPWKEYSRTVYMQSFMDSLINPAGWAAWSGDFALST
LYYAEYNNTGPGSNTSSRVTWPGYHVINSTDAISYTVSNFIAGNFWLPATGVPYTGDLL

Transcript Sequence

Gene sequence data has not been registered.